Optimal-Transport

Single-Cell Transcriptomics Reveals Evolutionary Reconfiguration of Embryonic Cell Fate Specification in the Sea Urchin Heliocidaris erythrogramma

We use optimal transport to analyze timing differences between He. urchin and Lv. urchin species.

abdull-j-massri

Developmental single-cell transcriptomics in the Lytechinus variegatus sea urchin embryo

We use optimal transport to analyze a time series of sea urchin development and reconstruct published GRNs.

abdull-j-massri